gene detail

Gene description

TAIR ID: AT1G60610

Short description: SBP (S-ribonuclease binding protein) family protein

Pathogen responsiveness: -1.06

General responsiveness: 0.29

Orthologous

Rice:

OS02G0130300

Maize:

GRMZM5G818514

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

cytoplasm

GO molecular function

unkown

Protein domain

Pfam	PF13920, Zinc finger, C3HC4 type (RING finger)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.70	1.11E-07
GSE37269	Oy0, WT, control	Oy0, WT, TEV 21 d	-2.98	1.45E-03
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.54	5.51E-11
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	1.76	2.97E-02
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	2.00	2.42E-16
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	1.64	4.13E-12
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.76	3.00E-13
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.98	6.13E-16