Gene: AT1G60170
     

Gene description


TAIR ID: AT1G60170

Short description: pre-mRNA processing ribonucleoprotein binding region-containing protein

Pathogen responsiveness: -3.09

General responsiveness: -2.25

GO biological process


methylation-dependent chromatin silencing, spliceosomal tri-snRNP complex assembly, response to cold, seed germination, RNA splicing, mRNA splicing, via spliceosome, embryo development ending in seed dormancy, cellular response to cold


GO cellular component


precatalytic spliceosome, spliceosomal tri-snRNP complex, Cajal body, U4/U6 x U5 tri-snRNP complex, nucleus, U4atac snRNP, U4 snRNP


GO molecular function


protein binding, RNA binding


Protein domain


PfamPF01798, snoRNA binding domain, fibrillarin
PfamPF09785, Prp31 C terminal domain
SMARTSM00931, NOSIC

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT2G02820, AT1G14350

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.579.82E-03






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