Gene: AT1G59890
     

Gene description


TAIR ID: AT1G59890

Short description: SIN3-like 5

Pathogen responsiveness: -3.05

General responsiveness: -2.37

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


histone deacetylation, regulation of transcription, DNA-templated, transcription, negative regulation of transcription from RNA polymerase II promoter


GO cellular component


nucleus, chromatin, histone deacetylase complex


GO molecular function


histone deacetylase activity, RNA polymerase II transcription corepressor activity


Protein domain


PfamPF16879, C-terminal domain of Sin3a protein
PfamPF02671, Paired amphipathic helix repeat
PfamPF08295, Sin3 family co-repressor
SMARTSM00761, HDAC_interact

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110

Target:
none

Protein-protein interaction network


No Interactor


Coexpression network

GSE56094_WT_HRPA-  view

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.552.74E-02






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