Gene: AT1G59660
     


Gene description


TAIR ID: AT1G59660

Short description: Nucleoporin autopeptidase

Pathogen responsiveness: -1.70

General responsiveness: 0.60

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat:

TA.5682.1.S1_AT  


GO biological process


RNA export from nucleus, posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery, telomere tethering at nuclear periphery, protein import into nucleus


GO cellular component


nuclear pore cytoplasmic filaments, nucleus, nuclear envelope


GO molecular function


structural constituent of nuclear pore, nuclear localization sequence binding, nucleocytoplasmic transporter activity, RNA binding, transporter activity


Protein domain


PfamPF04096, Nucleoporin autopeptidase

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.962.30E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.844.51E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.633.49E-06
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.769.19E-04






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