Gene: AT1G56540
     

Gene description


TAIR ID: AT1G56540

Short description: Disease resistance protein (TIR-NBS-LRR class) family

Pathogen responsiveness: -1.56

General responsiveness: -3.58

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


defense response, signal transduction


GO cellular component


nucleus, integral component of membrane


GO molecular function


ADP binding


Protein domain


PfamPF07725, Leucine Rich Repeat
PfamPF00931, NB-ARC domain
PfamPF01582, TIR domain
SMARTSM00255, TIR
SMARTSM00382, AAA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G24650, AT2G22300, AT4G36990, AT3G26790

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 1 h1.518.06E-06
GSE17464Penta, controlPenta, Flg22 2 h2.002.65E-08
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d2.621.44E-05
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.567.65E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.642.01E-08






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