Gene: AT1G56520
     

Gene description


TAIR ID: AT1G56520

Short description: Disease resistance protein (TIR-NBS-LRR class) family

Pathogen responsiveness: -1.62

General responsiveness: -2.24

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


defense response


GO cellular component


unkown


GO molecular function


unkown


Protein domain


PfamPF00931, NB-ARC domain
PfamPF07725, Leucine Rich Repeat
PfamPF01582, TIR domain
SMARTSM00255, TIR
SMARTSM00382, AAA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.957.58E-12
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.152.98E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.937.61E-09
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.711.14E-07
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min1.801.61E-02






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