gene detail

Gene description

TAIR ID: AT1G56120

Short description: Leucine-rich repeat transmembrane protein kinase

Pathogen responsiveness: 0.13

General responsiveness: 0.93

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

phosphorylation

GO cellular component

plasma membrane

GO molecular function

kinase activity

Protein domain

Pfam	PF13855, Leucine rich repeat
Pfam	PF07714, Protein tyrosine kinase
Pfam	PF11721, Di-glucose binding within endoplasmic reticulum
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G24050, AT4G34680, AT2G45050, AT3G60530

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

23 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	2.74	2.66E-02
GSE12856	Col, WT, control	Col, WT, Bg h	1.59	9.88E-08
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	1.66	4.70E-08
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 5 d	1.50	1.61E-03
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	2.30	4.79E-02
GSE18329	Col, WT, control	Col, WT, Hpa noco2 96 h	1.80	7.05E-10
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	1.97	1.22E-10
GSE18329	Col, wrky72_1, control	Col, wrky72_2, Hpa noco2 96 h	1.94	1.81E-10
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.61	3.28E-03
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.83	2.88E-10
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.86	3.09E-10
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.51	1.44E-07
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.51	1.14E-07
GSE5615	Col, WT, GST 4 h	Col, WT, GST+NPP1 4 h	1.51	8.26E-05
GSE5615	Col, WT, water 1 h	Col, WT, Flg22 1 h	1.86	9.42E-06
GSE5615	Col, WT, water 1 h	Col, WT, HrpZ 1 h	1.82	1.18E-05
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	2.46	1.59E-08
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	2.91	2.55E-10
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	1.71	5.46E-07
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	1.65	1.84E-04
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h	2.04	2.67E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 2-4 h	1.80	7.95E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	1.68	2.81E-04