gene detail

Gene description

TAIR ID: AT1G56090

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -2.08

General responsiveness: -2.07

Orthologous

Rice:

OS04G0616100

Maize:

GRMZM2G008060

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

cytoplasm

GO molecular function

unkown

Protein domain

SMART

SM00028, TPR

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G53660, AT2G02820, AT4G36990, AT1G14350

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE26679_WT_GC view
GSE26679_EDR1_GC view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.96	9.62E-12
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	2.12	1.64E-12
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.91	1.42E-11
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.30	2.35E-13
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.52	2.18E-02