Gene: AT1G55650
     

Gene description


TAIR ID: AT1G55650

Short description: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


transcription, DNA-templated, regulation of transcription


GO cellular component


nucleus, chloroplast


GO molecular function


transcription factor activity, sequence-specific DNA binding, DNA binding, protein binding


Protein domain


PfamPF00505, HMG (high mobility group) box
PfamPF01388, ARID/BRIGHT DNA binding domain
SMARTSM00398, HMG
SMARTSM00501, BRIGHT
SMARTSM01014, ARID

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Coexpression network


No coexpression gene


Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.962.42E-05






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