Gene: AT1G55530
     


Gene description


TAIR ID: AT1G55530

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -1.57

General responsiveness: -0.11

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G124441  

Wheat:

TA.3926.1.A1_AT  TA.11676.2.S1_AT  


GO biological process


unkown


GO cellular component


cytoplasm


GO molecular function


unkown


Protein domain


PfamPF13639, Ring finger domain
PfamPF14369, zinc-ribbon
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


No regulation information

Protein-protein interaction network


No Interactor


Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.531.17E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.548.59E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.871.30E-10
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.651.69E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.501.99E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h1.661.26E-03






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