Gene: AT1G55140
     

Gene description


TAIR ID: AT1G55140

Short description: Ribonuclease III family protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G445057  

Wheat: No orthologous gene

GO biological process


ncRNA processing, rRNA 5'-end processing, maturation of 4.5S rRNA, RNA processing


GO cellular component


chloroplast


GO molecular function


ribonuclease III activity


Protein domain


PfamPF00636, Ribonuclease III domain

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G11260

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.061.32E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.732.39E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.801.13E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.282.73E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.611.08E-09






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