Gene: AT1G54890
     

Gene description


TAIR ID: AT1G54890

Short description: Late embryogenesis abundant (LEA) protein-related

Pathogen responsiveness: -0.10

General responsiveness: 1.93

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


integral component of membrane, extracellular region


GO molecular function


molecular_function


Protein domain


PfamPF06830, Root cap

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790

Target:
none

Protein-protein interaction network


No Interactor


Coexpression network

GSE56094_WT_HRPA-  view

Differentially expressed condition


16 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, mpk6 ko, water 4 hCol, mpk6 ko, Flg22 4 h1.826.61E-03
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-3.111.36E-08
GSE17464Laer, controlLaer, PstDC3000 12 h-3.072.27E-08
GSE17464Laer, controlLaer, Flg22 2 h2.371.36E-05
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.551.40E-06
GSE17464Penta, controlPenta, PstDC3000 12 h-4.121.79E-12
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.635.87E-03
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h1.883.72E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h2.588.69E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.513.55E-06
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.722.19E-07
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h1.632.32E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.124.65E-10
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.217.27E-11
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h1.631.30E-06
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h2.082.42E-02






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