gene detail

Gene description

TAIR ID: AT1G54130

Short description: RELA/SPOT homolog 3

Pathogen responsiveness: -0.46

General responsiveness: -0.80

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

phosphorylation, guanosine tetraphosphate biosynthetic process, photosynthesis, leaf senescence

GO cellular component

chloroplast

GO molecular function

ATP binding, GTP binding, GTP diphosphokinase activity, kinase activity

Protein domain

Pfam	PF13328, HD domain
Pfam	PF04607, Region found in RelA / SpoT proteins
SMART	SM00954, RelA_SpoT
SMART	SM00471, HDc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	1.50	1.72E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.90	1.43E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.97	1.83E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.54	4.01E-12
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.69	5.20E-03
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-1.96	6.07E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.90	3.63E-04
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	3.23	2.05E-21
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	2.29	3.44E-13
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.98	1.08E-18
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	3.57	8.88E-24
GSE56094	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.64	1.86E-07
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	2.56	3.58E-15
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	2.04	6.65E-11
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.20	3.62E-06