gene detail

Gene description

TAIR ID: AT1G53870

Short description: Protein of unknown function (DUF567)

Pathogen responsiveness: NA

General responsiveness: 2.00

Orthologous

Rice:

OS07G0672600

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

chloroplast

GO molecular function

molecular_function

Protein domain

Pfam	PF04525, LURP-one-related

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110, AT2G02820, AT1G14350

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

22 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	-2.50	7.54E-07
GSE13739	Col, eds, control 7 d	Col, eds, G.orontii 7 d	-2.27	1.02E-05
GSE17464	Laer, control	Laer, PstDC3000 12 h	-1.58	2.12E-03
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-2.28	6.62E-06
GSE17464	Penta, control	Penta, PstDC3000 12 h	-2.65	2.33E-07
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.55	2.76E-05
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	-3.37	4.35E-05
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.42	1.62E-03
GSE37269	Oy0, WT, control	Oy0, WT, TEV 21 d	-2.81	1.18E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-3.81	3.47E-07
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-5.29	4.31E-10
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-1.61	1.21E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-1.57	1.67E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.99	3.21E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-2.67	2.18E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-3.66	1.92E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.97	3.31E-11
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-2.00	3.53E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.98	2.11E-09
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	-1.74	3.94E-08
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-3.30	9.07E-04
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.71	1.09E-03