Gene: AT1G52220
     


Gene description


TAIR ID: AT1G52220

No short description

Pathogen responsiveness: -0.47

General responsiveness: 3.16

Orthologous


Rice:

OS01G0761000  

Maize:

GRMZM2G302639  

Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


chloroplast, chloroplast thylakoid membrane, thylakoid, integral component of membrane


GO molecular function


molecular_function


Protein domain


PfamPF14159, CAAD domains of cyanobacterial aminoacyl-tRNA synthetase

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G73805, AT5G26920, AT3G24050, AT4G16110, AT4G34680, AT5G11260, AT2G45050, AT1G53160, AT3G60530, AT5G61850, AT5G18830

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


13 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.551.63E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.833.43E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.841.49E-10
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.242.68E-08
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.611.08E-08
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.671.15E-09
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.856.51E-11
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.511.62E-07
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.633.95E-09
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.982.60E-12
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.533.81E-08
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.905.70E-11
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.541.55E-07






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