gene detail

Gene description

TAIR ID: AT1G51805

Short description: Leucine-rich repeat protein kinase family protein

Pathogen responsiveness: -0.07

General responsiveness: 3.06

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

phosphorylation

GO cellular component

unkown

GO molecular function

kinase activity

Protein domain

Pfam	PF00069, Protein kinase domain
Pfam	PF12819, Carbohydrate-binding protein of the ER
Pfam	PF13855, Leucine rich repeat
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G62300

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 10 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

19 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.90	9.68E-06
GSE17464	Laer, control	Laer, PstDC3000 12 h	-1.75	4.55E-05
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-2.38	5.57E-08
GSE17464	Penta, control	Penta, PstDC3000 12 h	-2.05	1.56E-06
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.58	4.54E-05
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.73	1.76E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.83	7.72E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.65	1.45E-12
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-3.09	6.25E-06
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-4.54	4.28E-10
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-3.04	4.43E-22
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-2.38	1.64E-15
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-2.28	1.15E-14
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-2.26	7.50E-15
GSE56094	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.16	1.41E-12
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	-2.52	9.80E-17
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-2.58	5.70E-17
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.67	4.51E-03
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.81	2.14E-04