gene detail

Gene description

TAIR ID: AT1G50260

Short description: N-terminal-transmembrane-C2 domain type 5.1

Pathogen responsiveness: -1.78

General responsiveness: -3.08

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

plasma membrane, endoplasmic reticulum, integral component of membrane

GO molecular function

unkown

Protein domain

Pfam	PF00168, C2 domain
SMART	SM00239, C2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G13450, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.63	9.06E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.82	4.94E-12
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.61	7.45E-13