Gene: AT1G49760
     

Gene description


TAIR ID: AT1G49760

Short description: poly(A) binding protein 8

Pathogen responsiveness: -1.43

General responsiveness: -1.67

Orthologous


Rice:

OS09G0115400   OS04G0611500  

Maize:

GRMZM2G102829  

Wheat: No orthologous gene

GO biological process


regulation of translation, response to cadmium ion, viral process


GO cellular component


cytoplasm, cytosol, nucleus


GO molecular function


protein binding, translation initiation factor activity


Protein domain


PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PfamPF00658, Poly-adenylate binding protein, unique domain
SMARTSM00360, RRM
SMARTSM00361, RRM_1
SMARTSM00517, PolyA

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G24650, AT5G61850, AT3G26790, AT4G31800

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 8

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.751.01E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.247.07E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.622.02E-11






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