Gene: AT1G48500
     

Gene description


TAIR ID: AT1G48500

Short description: jasmonate-zim-domain protein 4

Pathogen responsiveness: -1.11

General responsiveness: -0.69

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat:

TAAFFX.37884.1.S1_AT  


GO biological process


response to wounding, negative regulation of nucleic acid-templated transcription, regulation of jasmonic acid mediated signaling pathway, defense response, transcription, DNA-templated, regulation of transcription, regulation of defense response


GO cellular component


nucleus


GO molecular function


protein binding, transcription corepressor activity


Protein domain


PfamPF09425, Divergent CCT motif
PfamPF06200, tify domain
SMARTSM00979, TIFY

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G27920

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 16 (Top20%)

click to view PPI network

Coexpression network

GSE13739_EDS16_GO  view

Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.993.23E-02
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-4.027.45E-07
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.262.61E-03
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-2.623.15E-04
GSE37269Oy0, WT, controlOy0, WT, TEV 21 d-2.542.35E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-4.864.37E-10






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