Gene: AT1G48410
     


Gene description


TAIR ID: AT1G48410

Short description: Stabilizer of iron transporter SufD / Polynucleotidyl transferase

Pathogen responsiveness: -2.06

General responsiveness: -2.64

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G039455  

Wheat:

TAAFFX.43978.1.A1_AT  


GO biological process


leaf vascular tissue pattern formation, response to auxin, viral gene silencing in virus induced gene silencing, response to far red light, posttranscriptional gene silencing, virus induced gene silencing, transcription, DNA-templated, gene silencing by miRNA, auxin metabolic process, regulation of transcription, leaf morphogenesis, innate immune response, defense response to virus, adventitious root development, stem cell development, embryo development ending in seed dormancy, viral process, adaxial/abaxial pattern specification


GO cellular component


cytoplasm, intracellular ribonucleoprotein complex, nucleus, cytosol


GO molecular function


endoribonuclease activity, metal ion binding, leaf proximal/distal pattern formation, protein binding


Protein domain


PfamPF16488, Argonaute linker 2 domain
PfamPF16486, N-terminal domain of argonaute
PfamPF12764, Glycine-rich region of argonaut
PfamPF08699, Argonaute linker 1 domain
PfamPF02170, PAZ domain
PfamPF16487, Mid domain of argonaute
PfamPF02171, Piwi domain
SMARTSM00950, Piwi
SMARTSM00949, PAZ
SMARTSM01163, DUF1785

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G24650, AT5G61850, AT5G14750, AT3G26790

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d1.522.95E-02






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