gene detail

Gene description

TAIR ID: AT1G44900

Short description: minichromosome maintenance (MCM2/3/5) family protein

Pathogen responsiveness: -1.80

General responsiveness: -0.77

Orthologous

Rice:

OS11G0484300 OS02G0797400

Maize:

GRMZM2G139894

Wheat: No orthologous gene

GO biological process

cell cycle, regulation of root meristem growth, embryo development, DNA replication initiation, root development, DNA unwinding involved in DNA replication, viral process, regulation of cell proliferation

GO cellular component

THO complex, nucleus, MCM complex, cytosol

GO molecular function

ATP binding, metal ion binding, DNA-dependent ATPase activity, DNA binding, protein binding, DNA helicase activity

Protein domain

Pfam	PF12619, Mini-chromosome maintenance protein 2
Pfam	PF14551, MCM N-terminal domain
Pfam	PF00493, MCM2/3/5 family
Pfam	PF17207, MCM OB domain
SMART	SM00350, MCM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03030: DNA replication

Transcriptional regulation

Regulator:
AT2G36010, AT5G22220, AT2G02820, AT5G02470, AT1G14350

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.80	5.09E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.93	6.21E-12
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.60	8.68E-06