gene detail

Gene description

TAIR ID: AT1G31350

Short description: KAR-UP F-box 1

Pathogen responsiveness: -0.99

General responsiveness: -0.75

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

protein ubiquitination, response to karrikin

GO cellular component

Cul3-RING ubiquitin ligase complex, nucleus

GO molecular function

protein binding, ubiquitin-protein transferase activity

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 8

Coexpression network

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	3.28	1.48E-11
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	3.01	5.56E-11
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	3.11	3.50E-11
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	3.17	1.35E-11
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.73	1.12E-02