gene detail

Gene description

TAIR ID: AT1G31220

Short description: Formyl transferase

Pathogen responsiveness: -1.95

General responsiveness: -3.29

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G155626

Wheat: No orthologous gene

GO biological process

biosynthetic process, 'de novo' IMP biosynthetic process, purine ribonucleotide biosynthetic process

GO cellular component

chloroplast

GO molecular function

phosphoribosylglycinamide formyltransferase activity, hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity

Protein domain

Pfam	PF00551, Formyl transferase

Metabolic pathway

PWY-6277: superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PWY-6122: 5-aminoimidazole ribonucleotide biosynthesis II
PWY-6121: 5-aminoimidazole ribonucleotide biosynthesis I
PWY-6613: tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
PWY-841: superpathway of purine nucleotides de novo biosynthesis I

KEGG pathway

PATH:ath00230: Purine metabolism
PATH:ath00670: One carbon pool by folate

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.63	1.47E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.54	2.29E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.52	1.73E-11