gene detail

Gene description

TAIR ID: AT1G30950

Short description: F-box family protein

Pathogen responsiveness: -2.22

General responsiveness: -4.66

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G109966

Wheat: No orthologous gene

GO biological process

cell differentiation, SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, ubiquitin-dependent protein catabolic process, regulation of transcription, DNA-templated, protein ubiquitination, flower development, transcription

GO cellular component

nucleus, ubiquitin ligase complex

GO molecular function

protein binding, ubiquitin-protein transferase activity

Protein domain

Pfam	PF00646, F-box domain
SMART	SM00256, FBOX

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G62360, AT1G69120, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 18 (Top10%)

click to view PPI network

Coexpression network

No coexpression gene

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	-2.12	4.03E-02
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.04	1.26E-02