Gene: AT1G30860
     

Gene description


TAIR ID: AT1G30860

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -1.90

General responsiveness: -1.87

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

Gene Ontology


No GO annotation

Protein domain


PfamPF13920, Zinc finger, C3HC4 type (RING finger)
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 33 (Top5%)

click to view PPI network

Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.145.16E-04
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-2.426.35E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.972.77E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.742.15E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.091.49E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.012.02E-10






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