Gene: AT1G30730
     

Gene description


TAIR ID: AT1G30730

Short description: FAD-binding Berberine family protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


oxidation-reduction process


GO cellular component


cytoplasm, extracellular region


GO molecular function


oxidoreductase activity, acting on CH-OH group of donors, electron carrier activity, flavin adenine dinucleotide binding


Protein domain


PfamPF08031, Berberine and berberine like
PfamPF01565, FAD binding domain

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT2G22300

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


33 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Di2, WT, controlDi2, WT, TEV 21 d3.225.55E-04
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d2.424.27E-03
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d4.108.02E-07
GSE37269St0, WT, controlSt0, WT, TEV 21 d5.231.92E-09
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt22.002.83E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.731.12E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.471.39E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.302.13E-10
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.212.28E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.785.67E-14
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.149.25E-10
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h2.936.25E-08
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h3.311.54E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h2.592.60E-07
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h3.291.42E-09
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h2.549.28E-07
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h2.471.42E-06
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h1.778.81E-04
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h1.544.22E-03
GSE56094Col, WT, control 2 hCol, WT, hrpA- 2 h2.191.11E-04
GSE56094Col, WT, control 3 hCol, WT, PstDC3000 3 h1.704.50E-03
GSE56094Col, WT, control 3 hCol, WT, hrpA- 3 h2.243.11E-05
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h2.291.49E-05
GSE56094Col, WT, control 4 hCol, WT, hrpA- 4 h2.241.64E-04
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h1.963.22E-04
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h2.938.06E-08
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h1.991.19E-04
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h3.242.85E-09
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h3.023.08E-08
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h2.799.63E-08
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h2.482.02E-06
GSE67100pDMR6:GFP GFP-negative, control 5 dpDMR6:GFP GFP-positive, Hpa Noks1 5 d4.122.72E-02
GSE67100pDMR6:GFP GFP-negative, control 7 dpDMR6:GFP GFP-positive, Hpa Noks1 7 d4.818.96E-03






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