Gene: AT1G30720
     

Gene description


TAIR ID: AT1G30720

Short description: FAD-binding Berberine family protein

Pathogen responsiveness: 2.01

General responsiveness: 2.64

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


oxidation-reduction process


GO cellular component


extracellular region


GO molecular function


flavin adenine dinucleotide binding, oxidoreductase activity, acting on CH-OH group of donors, electron carrier activity


Protein domain


PfamPF08031, Berberine and berberine like
PfamPF01565, FAD binding domain

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G62300, AT4G31550, AT4G31800

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


59 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h3.875.58E-03
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.316.51E-06
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 60min4.224.12E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-4.093.34E-09
GSE17464Laer, controlLaer, PstDC3000 12 h-2.941.04E-05
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-4.364.28E-10
GSE17464Penta, controlPenta, PstDC3000 12 h-3.316.40E-07
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h3.471.43E-15
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h2.449.25E-14
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h2.341.95E-13
GSE2169Col, WT, waterCol, WT, chitin 30 min1.607.23E-07
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min1.961.02E-06
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min1.722.90E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.733.58E-04
GSE37269Di2, WT, controlDi2, WT, TEV 21 d2.161.69E-02
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d4.565.85E-09
GSE37269St0, WT, controlSt0, WT, TEV 21 d3.981.80E-07
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt22.764.09E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.793.15E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.593.93E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.111.11E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.081.06E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.565.73E-08
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.191.65E-08
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.992.04E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.851.52E-12
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.891.95E-07
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min1.872.28E-04
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h3.726.05E-03
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h3.553.90E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h4.172.30E-10
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h3.174.12E-10
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h4.171.59E-10
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h3.291.97E-10
GSE5520Col, WT, control 7 hCol, WT, E.coli_TUV86 flic- 7 h2.704.25E-02
GSE56094Col, WT, control 2 hCol, WT, hrpA- 2 h1.716.32E-06
GSE56094Col, WT, control 3 hCol, WT, hrpA- 3 h2.166.73E-09
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h1.873.41E-07
GSE56094Col, WT, control 4 hCol, WT, hrpA- 4 h1.872.72E-06
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h2.683.31E-12
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h2.401.33E-10
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h2.015.48E-08
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h1.652.36E-06
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h1.871.08E-03
GSE5615Col, WT, water 1 hCol, WT, Flg22 1 h2.087.99E-04
GSE5615Col, WT, water 1 hCol, WT, HrpZ 1 h2.001.27E-03
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h5.311.34E-11
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h4.413.76E-10
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h3.422.61E-06
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.572.00E-03
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 HrpA- 4 h1.582.55E-02
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.821.31E-04
GSE67100pDMR6:GFP GFP-negative, control 7 dpDMR6:GFP GFP-positive, Hpa Noks1 7 d4.344.15E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h4.713.88E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.426.91E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min3.813.62E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h3.802.36E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h3.411.04E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min2.827.71E-04






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.