gene detail

Gene description

TAIR ID: AT1G30350

Short description: Pectin lyase-like superfamily protein

Pathogen responsiveness: -2.61

General responsiveness: -4.52

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

pectin catabolic process

GO cellular component

plasma membrane

GO molecular function

metal ion binding, pectate lyase activity, lyase activity

Protein domain

Pfam	PF00544, Pectate lyase
SMART	SM00656, Amb_all

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath00040: Pentose and glucuronate interconversions

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE13739_EDS16_GO view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	-2.64	3.73E-03