gene detail

Gene description

TAIR ID: AT1G28190

No short description

Pathogen responsiveness: 1.69

General responsiveness: -0.64

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G173377

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

molecular_function

Protein domain

Pfam	PF14009, Domain of unknown function (DUF4228)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT2G38250, AT3G27920

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

53 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	3.34	1.90E-09
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	3.24	1.74E-09
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	1.95	1.04E-10
GSE13739	Col, eds, control 7 d	Col, eds, G.orontii 7 d	1.77	3.50E-09
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	2.45	4.02E-02
GSE17464	Laer, control	Laer, Flg22 1 h	2.96	2.63E-06
GSE17464	Laer, control	Laer, Flg22 2 h	2.66	2.86E-05
GSE17464	Penta, control	Penta, Flg22 2 h	2.95	2.62E-06
GSE17464	Penta, control	Penta, Flg22 2 h	2.95	5.23E-06
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	2.50	1.82E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.51	7.81E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	2.83	6.09E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	4.62	6.74E-12
GSE2169	Col, rre1, water	Col, rre1, chitin 30 min	1.89	1.16E-10
GSE2169	Col, rre2, water	Col, rre2, chitin 30 min	1.58	2.33E-09
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	1.59	2.68E-04
GSE2538	Col, WT, control	Col, WT, crab shell chitin 30 min	2.38	3.23E-04
GSE2538	Col, WT, control	Col, WT, purified chitin octamer 30 min	1.79	2.27E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	2.18	1.28E-06
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	2.66	1.14E-07
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	2.05	2.40E-06
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	1.61	7.82E-05
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	3.05	3.79E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	2.38	6.07E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	3.35	1.80E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	3.72	3.39E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	4.31	5.83E-16
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	3.92	1.52E-15
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	3.95	2.69E-14
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.11	2.26E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	4.09	5.51E-15
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	3.97	3.76E-14
GSE4746	Col, WT, water 30 min	Col, WT, chitooctaose 30 min	2.75	5.80E-04
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	3.67	3.43E-02
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	5.18	1.38E-03
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	4.14	1.49E-12
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	4.31	6.67E-13
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	2.34	1.15E-02
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	2.14	4.08E-02
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.73	2.32E-02
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	2.23	2.34E-12
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.14	2.78E-11
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.42	1.11E-13
GSE5615	Col, WT, GST 4 h	Col, WT, GST+NPP1 4 h	1.68	3.22E-08
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	1.73	4.06E-09
GSE5616	Col, WT, water 12 h	Col, WT, P. infestans 12 h	1.92	9.33E-06
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	3.83	1.91E-09
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.05	4.84E-04
GSE8319	Col, WT, control	Col, WT, chitooctaose 30 min	1.66	2.75E-10
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h	2.53	3.48E-04
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	3.14	2.15E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 2-4 h	2.54	4.68E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	3.28	1.88E-04