gene detail

Gene description

TAIR ID: AT1G28060

Short description: Pre-mRNA-splicing factor 3

Pathogen responsiveness: -3.18

General responsiveness: -2.16

Orthologous

Rice:

Maize:

Wheat:

GO biological process

regulation of DNA methylation, mRNA processing, mRNA splicing, via spliceosome, embryo development ending in seed dormancy

GO cellular component

U4/U6 x U5 tri-snRNP complex, nucleoplasm, nucleus

GO molecular function

unkown

Protein domain

Pfam	PF08572, pre-mRNA processing factor 3 (PRP3)
Pfam	PF06544, Protein of unknown function (DUF1115)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03040: Spliceosome

Transcriptional regulation

Regulator:
AT5G53660, AT2G38250

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

GSE13739_EDS16_GO view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.51	1.49E-02