Gene: AT1G27890
     

Gene description


TAIR ID: AT1G27890

Short description: Polynucleotidyl transferase, ribonuclease H-like superfamily protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, RNA modification, transcription


GO cellular component


nucleus, mitochondrion


GO molecular function


ribonuclease activity, metal ion binding, RNA binding


Protein domain


PfamPF04857, CAF1 family ribonuclease

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G13790

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Di2, WT, controlDi2, WT, TEV 21 d2.219.66E-04
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d2.675.62E-06
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.822.79E-09
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.544.69E-08






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