gene detail

Gene description

TAIR ID: AT1G27190

Short description: Leucine-rich repeat protein kinase family protein

Pathogen responsiveness: -1.44

General responsiveness: -2.43

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway

GO cellular component

integral component of membrane, plasma membrane, nucleus, extracellular region

GO molecular function

protein kinase activity, ATP binding, protein serine/threonine kinase activity, kinase activity

Protein domain

Pfam	PF13516, Leucine Rich repeat
Pfam	PF08263, Leucine rich repeat N-terminal domain
Pfam	PF07714, Protein tyrosine kinase

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 34 (Top5%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.62	9.55E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.83	1.64E-12