gene detail

Gene description

TAIR ID: AT1G26420

Short description: FAD-binding Berberine family protein

Pathogen responsiveness: NA

General responsiveness: 0.21

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

oxidation-reduction process

GO cellular component

extracellular region, cytoplasm

GO molecular function

flavin adenine dinucleotide binding, electron carrier activity, oxidoreductase activity, acting on CH-OH group of donors

Protein domain

Pfam	PF08031, Berberine and berberine like
Pfam	PF01565, FAD binding domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G56110

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

93 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	5.77	6.88E-11
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	5.73	1.44E-05
GSE67100	pDMR6:GFP GFP-negative, control 7 d	pDMR6:GFP GFP-positive, Hpa Noks1 7 d	5.49	1.59E-02
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	5.24	3.47E-17
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	5.18	3.17E-14
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	5.10	3.86E-02
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	4.98	2.48E-12
GSE16472	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	4.96	3.09E-02
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	4.76	2.07E-10
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	4.72	3.14E-04

Showing 1 to 10 of 93 entries