Gene: AT1G22760
     

Gene description


TAIR ID: AT1G22760

Short description: poly(A) binding protein 3

Pathogen responsiveness: -3.07

General responsiveness: -3.19

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, regulation of translation, regulation of nuclear-transcribed mRNA poly(A) tail shortening, mRNA processing


GO cellular component


cytoplasm, nucleus


GO molecular function


translation initiation factor activity, RNA binding


Protein domain


PfamPF00658, Poly-adenylate binding protein, unique domain
PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00361, RRM_1
SMARTSM00517, PolyA
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE13739_EDS16_GO  view

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-1.911.97E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.937.45E-03






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