Gene: AT1G20823
     

Gene description


TAIR ID: AT1G20823

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -0.21

General responsiveness: -0.08

Orthologous


Rice:

OS02G0686100   OS01G0755700   OS07G0631200  

Maize:

GRMZM2G057789   GRMZM2G081285  

Wheat: No orthologous gene

GO biological process


defense response, response to chitin, regulation of flower development, proteasome-mediated ubiquitin-dependent protein catabolic process, cellular response to cold, protein ubiquitination, regulation of phosphate transport


GO cellular component


plasma membrane, chloroplast, integral component of membrane


GO molecular function


ubiquitin protein ligase activity, metal ion binding


Protein domain


PfamPF13639, Ring finger domain
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110, AT2G47190

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


21 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.682.13E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.191.37E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.801.06E-04
GSE20278Col, RPL18-HF, control, polysomal RNACol, RPL18-HF, TuMV 10 d, polysomal RNA-1.962.91E-03
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d-2.261.09E-03
GSE2169Col, WT, waterCol, WT, chitin 30 min2.014.74E-06
GSE2169Col, rre1, waterCol, rre1, chitin 30 min2.373.21E-07
GSE2169Col, rre2, waterCol, rre2, chitin 30 min2.082.24E-06
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min2.189.68E-07
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min2.141.24E-06
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.591.34E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.131.92E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.773.12E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.639.75E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.571.59E-07
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.579.47E-13
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min2.839.87E-05
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-1.923.20E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.932.53E-09
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.629.93E-03
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min2.307.37E-12






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