Gene: AT1G17460
     

Gene description


TAIR ID: AT1G17460

Short description: TRF-like 3

Pathogen responsiveness: -1.13

General responsiveness: -0.84

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


telomeric loop formation


GO cellular component


nucleus, cytosolic ribosome, nuclear telomere cap complex


GO molecular function


transcription factor activity, sequence-specific DNA binding, double-stranded telomeric DNA binding


Protein domain


PfamPF00249, Myb-like DNA-binding domain
SMARTSM00717, SANT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G24050, AT5G11260, AT5G49450

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE20278Col, RPL18-HF, control, polysomal RNACol, RPL18-HF, TuMV 10 d, polysomal RNA1.811.97E-02
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.121.97E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.555.28E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.313.71E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.681.38E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h1.831.60E-07






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