Gene: AT1G17380
     


Gene description


TAIR ID: AT1G17380

Short description: jasmonate-zim-domain protein 5

Pathogen responsiveness: 1.55

General responsiveness: 0.96

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, regulation of jasmonic acid mediated signaling pathway, response to jasmonic acid, transcription, negative regulation of nucleic acid-templated transcription, regulation of defense response, response to wounding, defense response


GO cellular component


nucleus


GO molecular function


protein binding, transcription corepressor activity


Protein domain


PfamPF09425, Divergent CCT motif
PfamPF06200, tify domain
SMARTSM00979, TIFY

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT3G24050, AT5G11260, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 21 (Top10%)

click to view PPI network

Differentially expressed condition


42 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h2.554.62E-05
GSE12856Col, ataf1, controlCol, ataf1, Bg h3.432.37E-06
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 30 min2.649.49E-03
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 60min1.771.86E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-2.704.73E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h3.241.42E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h3.522.84E-07
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h3.339.30E-07
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h5.235.95E-14
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.701.28E-03
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h2.079.72E-04
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min1.578.47E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-1.977.48E-04
GSE37255Ws-4, WT, controlWs-4, WT, Hyaloperonospora arabidopsidis strain Emwa1 3 d1.982.43E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.841.41E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 hrcC-1.504.75E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.742.04E-06
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV2.641.19E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.884.88E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.404.31E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h3.457.39E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.751.87E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.446.12E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.582.77E-15
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.063.12E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.841.70E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h4.682.67E-14
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h3.074.61E-11
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min2.231.05E-03
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h3.744.48E-02
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h3.702.70E-02
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h3.171.74E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.993.29E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.687.14E-05
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h5.511.91E-09
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h3.713.10E-08
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h2.516.05E-07
GSE5685Col, WT, control 24 hCol, WT, Ps ES4326 24 h1.524.95E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h2.631.60E-02
GSE73351Ws-4, WT, controlWs-4, WT, H.ara Emwa1 3 d1.986.71E-04
GSE73351Ws-4, ugt76b1, controlWs-4, ugt76b1, H.ara Emwa1 3 d1.891.63E-03
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min1.722.51E-11






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