gene detail

Gene description

TAIR ID: AT1G16970

Short description: KU70 homolog

Pathogen responsiveness: -2.41

General responsiveness: -1.17

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

telomere maintenance, double-strand break repair via nonhomologous end joining, DNA repair, response to heat, DNA recombination

GO cellular component

nucleus, cytoplasm, nuclear chromosome, telomeric region, Ku70:Ku80 complex

GO molecular function

ATP binding, protein binding, telomeric DNA binding, ATP-dependent DNA helicase activity, damaged DNA binding

Protein domain

Pfam	PF02735, Ku70/Ku80 beta-barrel domain
Pfam	PF03730, Ku70/Ku80 C-terminal arm
Pfam	PF02037, SAP domain
Pfam	PF03731, Ku70/Ku80 N-terminal alpha/beta domain
SMART	SM00513, SAP
SMART	SM00559, Ku78

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03450: Non-homologous end-joining

Transcriptional regulation

Regulator:
AT3G24050

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 5

Coexpression network

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.68	9.53E-07