Gene: AT1G13980
     


Gene description


TAIR ID: AT1G13980

Short description: sec7 domain-containing protein

Pathogen responsiveness: -1.90

General responsiveness: -2.02

GO biological process


establishment of planar polarity, cell wall organization, phloem or xylem histogenesis, unidimensional cell growth, regulation of ARF protein signal transduction, embryonic pattern specification, endosome transport via multivesicular body sorting pathway, cell adhesion, lateral root formation, longitudinal axis specification, regulation of vesicle targeting, to, from or within Golgi, cytokinesis by cell plate formation, embryo development ending in seed dormancy, vesicle-mediated transport, root hair cell differentiation, basipetal auxin transport, protein transport, endocytosis


GO cellular component


endosome membrane, trans-Golgi network, plasma membrane, cytoplasm, endosome, cytosol


GO molecular function


identical protein binding, ARF guanyl-nucleotide exchange factor activity, GTP:GDP antiporter activity, protein binding, protein homodimerization activity


Protein domain


PfamPF01369, Sec7 domain
PfamPF12783, Guanine nucleotide exchange factor in Golgi transport N-terminal
SMARTSM00222, Sec7

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT2G02820, AT1G14350

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h1.586.61E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.682.58E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.577.62E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.672.65E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.671.39E-10






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