gene detail

Gene description

TAIR ID: AT1G13960

Short description: WRKY DNA-binding protein 4

Pathogen responsiveness: -1.43

General responsiveness: -2.37

Orthologous

Rice:

OS12G0507300

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, negative regulation of defense response to bacterium, response to salicylic acid, response to jasmonic acid, response to ethylene, defense response, regulation of defense response to fungus, transcription

GO cellular component

nucleus

GO molecular function

metal ion binding, transcription factor activity, sequence-specific DNA binding, transcription regulatory region DNA binding

Protein domain

Pfam	PF03106, WRKY DNA -binding domain
SMART	SM00774, WRKY

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
AT2G14610

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.69	1.65E-09
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.57	4.71E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.99	7.44E-11
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.95	6.14E-11
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.03	9.09E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.75	1.57E-02