Gene: AT1G13730
     

Gene description


TAIR ID: AT1G13730

Short description: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain

Pathogen responsiveness: -1.26

General responsiveness: -1.63

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


transport, nucleocytoplasmic transport


GO cellular component


cytoplasm


GO molecular function


unkown


Protein domain


PfamPF02136, Nuclear transport factor 2 (NTF2) domain
PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Flg22 2 h-1.642.55E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.462.29E-09
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.651.69E-04






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