Gene: AT1G13340
Gene description
TAIR ID: AT1G13340
Short description: Regulator of Vps4 activity in the MVB pathway protein
Pathogen responsiveness: 2.65
General responsiveness: 1.86
GO biological process
response to oxidative stress, protein transport
GO cellular component
cytoplasm
GO molecular function
unkown
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
85 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE12856 | Col, WT, control | Col, WT, Bg h | 2.59 | 4.33E-06 |
| GSE12856 | Col, ataf1, control | Col, ataf1, Bg h | 3.67 | 1.31E-07 |
| GSE13739 | Col, WT, control 0 h | Col, WT, G.orontii 5 d | 1.70 | 1.88E-08 |
| GSE13739 | Col, WT, control 7 d | Col, WT, G.orontii 7 d | 3.86 | 1.93E-20 |
| GSE13739 | Col, eds, control 7 d | Col, eds, G.orontii 7 d | 3.81 | 6.54E-20 |
| GSE17464 | Laer, JA+Flg22 0 h | Laer, JA+Flg22 1 h | 1.79 | 9.49E-03 |
| GSE17464 | Laer, control | Laer, Flg22 1 h | 3.69 | 4.18E-08 |
| GSE17464 | Laer, control | Laer, Flg22 2 h | 2.50 | 7.63E-05 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | 2.43 | 9.23E-05 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | 1.58 | 9.35E-03 |
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | 3.13 | 2.87E-04 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | 3.90 | 2.74E-05 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | 3.26 | 1.78E-04 |
| GSE18329 | Col, WT, control | Col, WT, Hpa noco2 96 h | 1.75 | 1.25E-11 |
| GSE18329 | Col, wrky72_1, control | Col, wrky72_1, Hpa noco2 96 h | 2.61 | 1.40E-14 |
| GSE18329 | Col, wrky72_1, control | Col, wrky72_2, Hpa noco2 96 h | 2.35 | 8.23E-14 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | 4.71 | 2.23E-10 |
| GSE20278 | Col, RPL18-HF, control, polysomal RNA | Col, RPL18-HF, TuMV 10 d, polysomal RNA | 2.41 | 1.79E-04 |
| GSE20278 | Col, RPL18-HF, control | Col, RPL18-HF, TuMV 10 d | 2.92 | 5.06E-05 |
| GSE2169 | Col, rre2, water | Col, rre2, chitin 30 min | 1.71 | 1.76E-07 |
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a 6 h | 4.31 | 1.68E-10 |
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a C216aA 6 h | 2.15 | 2.77E-05 |
| GSE21920 | Col, WT, mock | Col, WT, Pto 6 h | 1.78 | 7.52E-04 |
| GSE21920 | Col, ulp1, mock | Col, ulp1, Pto 6 h | 2.28 | 1.38E-05 |
| GSE2538 | Col, WT, control | Col, WT, crab shell chitin 30 min | 2.11 | 1.84E-06 |
| GSE2538 | Col, WT, control | Col, WT, purified chitin octamer 30 min | 1.57 | 1.78E-05 |
| GSE26679 | Col, WT, GC 0 h | Col, WT, GC 96 h | 1.51 | 1.08E-03 |
| GSE37269 | Di2, WT, control | Di2, WT, TEV 21 d | 1.64 | 4.87E-02 |
| GSE37269 | Ei2, WT, control | Ei2, WT, TEV 21 d | 1.95 | 3.48E-03 |
| GSE37269 | Ler0, WT, control | Ler0, WT, TEV 21 d | 2.28 | 4.56E-04 |
| GSE37921 | Col, WT, control | Col, WT, CMV | 2.03 | 5.09E-04 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 | 3.15 | 3.01E-07 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 EV | 3.20 | 1.58E-07 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 AvrRpt2 | 3.15 | 2.39E-07 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 EV | 2.10 | 5.45E-05 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | 5.93 | 7.32E-17 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 3.30 | 5.25E-13 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 5.49 | 2.47E-16 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 6.34 | 3.80E-17 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 5.68 | 1.03E-16 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 6.40 | 2.73E-17 |
| GSE45214 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 4.64 | 2.39E-14 |
| GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 4.06 | 2.32E-13 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 5.63 | 8.56E-16 |
| GSE45214 | Col, npr1, PstDC3000 AvrRpt2 0 h | Col, npr1, PstDC3000 AvrRpt2 4 h | 4.32 | 8.66E-14 |
| GSE4746 | Col, WT, water 30 min | Col, WT, chitooctaose 30 min | 2.65 | 8.29E-05 |
| GSE50526 | Col, WT, mock 24 h | Col, WT, A. brassicicola 24 h | 2.65 | 2.06E-02 |
| GSE50526 | Col, WT, mock 9 h | Col, WT, A. brassicicola 9 h | 3.82 | 5.13E-04 |
| GSE52979 | Col, WT, acetone | Col, WT, acetone flg22_2 h | 1.52 | 4.27E-06 |
| GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | 1.56 | 2.70E-06 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | 5.01 | 7.11E-07 |
| GSE5520 | Col, WT, control 24 h | Col, WT, PsDC3118 Cor- 24 h | 2.95 | 2.13E-03 |
| GSE5520 | Col, WT, control 24 h | Col, WT, PstDC3000 24 h | 4.49 | 5.14E-06 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | 3.91 | 7.94E-07 |
| GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | 3.92 | 4.28E-16 |
| GSE56094 | Col, WT, control 10 h | Col, WT, hrpA- 10 h | 1.56 | 7.90E-04 |
| GSE56094 | Col, WT, control 11 h | Col, WT, PstDC3000 11 h | 3.98 | 7.34E-16 |
| GSE56094 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 3.78 | 7.66E-15 |
| GSE56094 | Col, WT, control 12 h | Col, WT, hrpA- 12 h | 2.01 | 4.14E-05 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | 4.02 | 1.67E-16 |
| GSE56094 | Col, WT, control 5 h | Col, WT, PstDC3000 5 h | 2.00 | 4.99E-05 |
| GSE56094 | Col, WT, control 6 h | Col, WT, PstDC3000 6 h | 3.07 | 4.43E-10 |
| GSE56094 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | 2.72 | 1.42E-08 |
| GSE56094 | Col, WT, control 7 h | Col, WT, hrpA- 7 h | 1.51 | 1.74E-03 |
| GSE56094 | Col, WT, control 8 h | Col, WT, PstDC3000 8 h | 3.47 | 5.12E-13 |
| GSE56094 | Col, WT, control 8 h | Col, WT, hrpA- 8 h | 2.09 | 7.10E-06 |
| GSE56094 | Col, WT, control 9 h | Col, WT, PstDC3000 9 h | 3.91 | 4.13E-15 |
| GSE56094 | Col, WT, control 9 h | Col, WT, hrpA- 9 h | 2.06 | 1.33E-05 |
| GSE5615 | Col, WT, GST 4 h | Col, WT, GST+NPP1 4 h | 2.28 | 8.54E-07 |
| GSE5615 | Col, WT, water 4 h | Col, WT, HrpZ 4 h | 2.76 | 6.14E-09 |
| GSE5616 | Col, WT, water 12 h | Col, WT, P. infestans 12 h | 1.69 | 2.20E-04 |
| GSE5616 | Col, WT, water 6 h | Col, WT, P. infestans 6 h | 1.84 | 3.85E-05 |
| GSE5685 | Col, WT, control 16 h | Col, WT, Ps ES4326 AvrRpt2 16 h | 1.77 | 4.83E-02 |
| GSE5686 | Col, WT, control 4 d | Col, WT, G.orontii 4 d | 1.93 | 5.76E-09 |
| GSE5686 | Col, WT, control 5 d | Col, WT, G.orontii 5 d | 2.89 | 8.13E-14 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | 4.12 | 3.23E-02 |
| GSE6176 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 3.62 | 1.46E-06 |
| GSE6556 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 48 h | 1.54 | 2.80E-03 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | 3.37 | 1.52E-06 |
| GSE73351 | Ws-4, map65_3, control | Ws-4, map65_3, H.ara Emwa1 3 d | 2.79 | 5.20E-04 |
| GSE8319 | Col, WT, control | Col, WT, chitooctaose 30 min | 1.65 | 4.21E-11 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h | 4.36 | 1.04E-03 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | 6.40 | 2.10E-04 |
| GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 2-4 h | 3.74 | 3.66E-03 |
| GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 6 h | 5.98 | 3.82E-04 |
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