gene detail

Gene description

TAIR ID: AT1G12520

Short description: copper chaperone for SOD1

Pathogen responsiveness: -1.85

General responsiveness: -0.57

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

metal ion transport, superoxide metabolic process, cellular copper ion homeostasis

GO cellular component

chloroplast, chloroplast stroma, cytoplasm, cytosol

GO molecular function

zinc ion binding, superoxide dismutase copper chaperone activity

Protein domain

Pfam	PF00080, Copper/zinc superoxide dismutase (SODC)
Pfam	PF00403, Heavy-metal-associated domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G22300

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

Coexpression network

GSE13739_EDS16_GO view
GSE5686_WT_GO view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE20278	Col, RPL18-HF, control, polysomal RNA	Col, RPL18-HF, TuMV 10 d, polysomal RNA	1.93	2.87E-04
GSE20278	Col, RPL18-HF, control	Col, RPL18-HF, TuMV 10 d	1.83	3.25E-04
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	1.67	3.22E-02