Gene: AT1G11400
     

Gene description


TAIR ID: AT1G11400

Short description: partner of Y14-MAGO

Pathogen responsiveness: -1.41

General responsiveness: -1.51

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G180558  

Wheat: No orthologous gene

GO biological process


nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, regulation of translation, positive regulation of gene expression, mRNA transport


GO cellular component


nucleoplasm, nucleus, nucleolus, cytoplasm


GO molecular function


RNA binding


Protein domain


PfamPF09282, Mago binding
SMARTSM01273, Mago-bind

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G53660, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


10 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.631.51E-04
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.533.23E-08
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h1.542.76E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.911.64E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.813.69E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.024.85E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.141.01E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.013.20E-07
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.911.33E-08
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.651.82E-07






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