gene detail

Gene description

TAIR ID: AT1G10650

Short description: SBP (S-ribonuclease binding protein) family protein

Pathogen responsiveness: -1.16

General responsiveness: -1.25

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

cytoplasm

GO molecular function

unkown

Protein domain

Pfam	PF13920, Zinc finger, C3HC4 type (RING finger)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G66600, AT5G13790

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE16472	Col, WT, Flg22 0 min	Col, WT, Flg22 30 min	2.88	9.49E-03
GSE16472	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	2.23	1.65E-02
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.82	1.22E-06
GSE17464	Laer, control	Laer, Flg22 1 h	1.67	6.85E-06
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-1.89	4.18E-07
GSE17464	Penta, control	Penta, PstDC3000 12 h	-1.90	3.89E-07
GSE17464	Penta, control	Penta, Flg22 2 h	1.67	7.21E-06
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.61	1.08E-02