gene detail

Gene description

TAIR ID: AT1G10200

Short description: GATA type zinc finger transcription factor family protein

Pathogen responsiveness: -1.09

General responsiveness: -0.72

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G004959

Wheat: No orthologous gene

GO biological process

actin filament bundle assembly

GO cellular component

cytoplasm, plasma membrane, cytoskeleton

GO molecular function

metal ion binding, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF00412, LIM domain
SMART	SM00132, LIM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	1.60	3.77E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.80	3.11E-10
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	2.16	7.48E-12
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.77	3.68E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.52	2.65E-13
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.70	2.57E-02
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	-1.84	1.03E-02