gene detail

Gene description

TAIR ID: AT1G09660

Short description: RNA-binding KH domain-containing protein

Pathogen responsiveness: -1.12

General responsiveness: -1.44

Orthologous

Rice: No orthologous gene

Maize:

Wheat:

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

RNA binding

Protein domain

Pfam	PF16544, Homodimerisation region of STAR domain protein
SMART	SM00322, KH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 15 (Top20%)

Coexpression network

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-1.54	1.33E-03
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.98	3.70E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.56	9.25E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.58	1.29E-13
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.53	1.73E-07