gene detail

Gene description

TAIR ID: AT1G09540

Short description: myb domain protein 61

Pathogen responsiveness: -2.64

General responsiveness: -2.43

Orthologous

Rice:

OS05G0140100

Maize:

GRMZM2G127490

Wheat: No orthologous gene

GO biological process

regulation of stomatal movement, regulation of transcription from RNA polymerase II promoter, regulation of transcription, DNA-templated, xylem development, cell differentiation, vasculature development, response to auxin, seed coat development, root development, transcription

GO cellular component

nucleus

GO molecular function

sequence-specific DNA binding, transcription regulatory region DNA binding, transcription factor activity, RNA polymerase II transcription factor recruiting, RNA polymerase II transcription factor activity

Protein domain

Pfam	PF00249, Myb-like DNA-binding domain
SMART	SM00717, SANT

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
none

Target:
AT5G07070, AT2G34250, AT2G40170, AT4G26220, AT3G48060, AT4G37440, AT1G62990, AT1G28400, AT1G24430, AT2G45220, AT3G11550, AT3G53910, AT2G03913, AT1G53980

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.61	7.94E-05
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	-1.68	6.85E-03
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-1.66	3.73E-03