gene detail

Gene description

TAIR ID: AT1G09230

Short description: RNA-binding (RRM/RBD/RNP motifs) family protein

Pathogen responsiveness: -2.16

General responsiveness: -1.68

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

mRNA splicing, via spliceosome, inflorescence development

GO cellular component

nucleus, U12-type spliceosomal complex

GO molecular function

U12 snRNA binding

Protein domain

Pfam	PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART	SM00360, RRM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

GSE13739_EDS16_GO view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Penta, control	Penta, Flg22 2 h	-1.57	2.98E-04