Gene: AT1G09060
     


Gene description


TAIR ID: AT1G09060

Short description: Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase

Pathogen responsiveness: -3.14

General responsiveness: -2.62

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G428933  

Wheat: No orthologous gene

GO biological process


histone H3-K9 demethylation, protein ubiquitination, negative regulation of histone H3-K9 acetylation, positive regulation of gene expression, regulation of transcription, DNA-templated, negative regulation of histone H3-K9 methylation


GO cellular component


nucleus, chromatin


GO molecular function


ubiquitin protein ligase activity, histone demethylase activity (H3-K9 specific), chromatin DNA binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF02373, JmjC domain, hydroxylase
PfamPF10497, Zinc-finger domain of monoamine-oxidase A repressor R1
PfamPF08879, WRC
SMARTSM00558, JmjC

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G66600, AT5G13790, AT5G41315

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE26679_EDR1_GC  view

Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.